SBCDDB: Sleeping Beauty  Cancer Driver Database

SBCDDB is an integrated SB data from primary tumor models into an analysis and reporting framework, the Sleeping Beauty Cancer Driver DataBase (SBCDDB, http://sbcddb.moffitt.org), which identifies drivers in individual tumors or tumor populations. . Newberg et al., Published online before print October 20, 2017. doi:10.1093/nar/gkx956

Protocols


SBCapSeq Protocol


a method for selective cloning of Sleeping Beauty transposon insertions using liquid capture hybridization and Ion Torrent semiconductor sequencing. Mann et al., Published online 03 Aug 2016 at Protocol Exchange. doi:10.1038/protex.2016.053

SBsplinkSeq Protocol


a semi-quantiative splinkerette PCR and acoustic shearing method for selective cloning of Sleeping Beauty transposon insertions using multiplex Illumina sequencing. Coming soon!


 

In Silico Lab Tools


Useful Web sites